Details of Microbe Species (MIC)

General Information of MIC (ID: MC0877)
  MIC Name
Clostridium sporogenes
  Synonym
Bacillus sporogenes var. A, Clostridium sporogenes var. A, Metchnikovillus sporogenes
  Lineage Kingdom: Bacteria
Phylum: Firmicutes
Class: Clostridia
Order: Eubacteriales
Family: Clostridiaceae
Genus: Clostridium
  Oxygen Sensitivity
Anaerobe
  Microbial Metabolism
Saccharolytic; Fermentative
  Gram
Positive
  Description
Clostridium sporogenes is a species of gram-positive bacteria that belongs to the genus Clostridium.
  External Links Taxonomy ID 1509

Full List of Metabolite(s) Produced by This MIC
     Molecule Type: Tryptophan metabolites
           Metabolite Name: Indole Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [precursors]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation DNMT EM Info . . . [1]
           Metabolite Name: Indole-3-acetate Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [others]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation DNMT EM Info . . . [1]
           Metabolite Name: Indole-3-aldehyde Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [others]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation DNMT EM Info . . . [1]
           Metabolite Name: Indole-3-carboxaldehyde Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [others]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation DNMT EM Info . . . [1]
           Metabolite Name: Indole-3-Propionate Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [others]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation DNMT EM Info . . . [1]
           Metabolite Name: Kynurenine Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [intermediate]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells AGRP . [1]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells ARNT2 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells ASCL1 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells AVP . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells BMP7 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells CARTPT . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells CCK . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells CORT . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells CRH . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells GALP . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells GAST . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells GHRH . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells GNRH2 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells HCRT . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells HMX2 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells KISS1 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells LHX1 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells NKX2-1 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells NPVF . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells NPW . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells NPY . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells NR5A1 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells OTP . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells OXT . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells PDYN . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells PENK . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells PNOC . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells POMC . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells POU3F2 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells PRLH . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells RAX . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells SHH . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells SIM1 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells SIX3 . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells SST . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells TRH . [1], [2]
Histone O-GlcNAcylation H2AS40 EM Info hiPSC-derived neural cells VAX1 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells AGRP . [1]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells ARNT2 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells ASCL1 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells AVP . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells BMP7 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells CARTPT . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells CCK . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells CORT . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells CRH . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells GALP . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells GAST . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells GHRH . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells GNRH2 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells HCRT . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells HMX2 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells KISS1 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells LHX1 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells NKX2-1 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells NPVF . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells NPW . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells NPY . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells NR5A1 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells OTP . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells OXT . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells PDYN . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells PENK . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells PNOC . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells POMC . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells POU3F2 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells PRLH . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells RAX . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells SHH . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells SIM1 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells SIX3 . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells SST . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells TRH . [1], [2]
Histone Trimethylation H3K4 EM Info hiPSC-derived neural cells VAX1 . [1], [2]
           Metabolite Name: Quinolic acid Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [intermediate]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation DNMT EM Info . . . [1], [2]
           Metabolite Name: Serotonin Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [others]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation SLC6A4 EM Info T cells promoter Health [1], [2]
           Metabolite Name: Tryptamine Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [intermediate]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation DNMT EM Info . . . [1], [3]


References
1 Gut Microbiota as Important Mediator Between Diet and DNA Methylation and Histone Modifications in the Host. Nutrients. 2020 Feb 25;12(3):597. doi: 10.3390/nu12030597.
2 Kynurenine, 3-OH-kynurenine, and anthranilate are nutrient metabolites that alter H3K4 trimethylation and H2AS40 O-GlcNAcylation at hypothalamus-related loci. Sci Rep. 2019 Dec 24;9(1):19768. doi: 10.1038/s41598-019-56341-x.
3 Peripheral SLC6A4 DNA methylation is associated with in vivo measures of human brain serotonin synthesis and childhood physical aggression. PLoS One. 2012;7(6):e39501. doi: 10.1371/journal.pone.0039501. Epub 2012 Jun 20.

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