General Information of Metabolite (ID: MT020)
  Meta Name
Serotonin
  Unify Name
Serotonin
  Synonym    Click to Show/Hide the Detailed Synonyms of This Metabolite
3-(2-Aminoethyl)-1H-indol-5-ol;5-HT;5-Hydroxytryptamine;Enteramine;Serotonine;Thrombocytin;Thrombotonin;Hippophaine;Hydroxytryptamine;5 Hydroxytryptamine;3-(2-Aminoethyl)indol-5-ol;3-(b-Aminoethyl)-5-hydroxyindole;5-HTA;5-Hydroxy-3-(b-aminoethyl)indole;5-Hydroxy-tryptamine;5-Hydroxyltryptamine;5-Hydroxytriptamine;Antemovis;DS Substance;Enteramin
  Molecule Type
Tryptophan metabolites
  Formula
C10H13N2O
  Inchi Key
QZAYGJVTTNCVMB-UHFFFAOYSA-N
  Description    Click to Show/Hide the Detailed Description of This Metabolite
Serotonin, also known as enteramine or 5-HT, belongs to the class of organic compounds known as serotonins. Serotonins are compounds containing a serotonin moiety, which consists of an indole that bears an aminoethyl a position 2 and a hydroxyl group at position 5. Serotonin is a very strong basic compound (based on its pKa). Serotonin exists in all living organisms, ranging from bacteria to humans. Within humans, serotonin participates in a number of enzymatic reactions. In particular, serotonin can be converted into serotonin through its interaction with the enzyme 5-hydroxytryptamine receptor 7. In addition, serotonin can be converted into serotonin through the action of the enzyme 5-hydroxytryptamine receptor 7. In humans, serotonin is involved in excitatory neural signalling through 5-htr 7 and serotonin. Outside of the human body, Serotonin is found, on average, in the highest concentration within a few different foods, such as sea-buckthornberries, common walnuts, and oats and in a lower concentration in swiss chards, nanking cherries, and dills. Serotonin has also been detected, but not quantified in, several different foods, such as fruits, bitter gourds, yellow wax beans, scarlet beans, and green bell peppers. This could make serotonin a potential biomarker for the consumption of these foods. Serotonin has three different modes of action in the nervous system: as transmitter, acting locally at synaptic boutons; upon diffusion at a distance from its release sites, producing paracrine (also called volume) effects, and by circulating in the blood stream, producing hormonal effects. Serotonin, with regard to humans, has been found to be associated with several diseases such as colorectal cancer, brunner syndrome, hypothyroidism, and eosinophilic esophagitis; serotonin has also been linked to the inborn metabolic disorder aromatic l-amino acid decarboxylase deficiency. Serotonin is also a microbial metabolite, urinary serotonin is produced by Candida, Streptococcus, Escherichia, and Enterococcus (PMID: 24621061 ). Not evaluated by the FDA, homeopathic product. For temporary relief of nervousness, anxiety, mood swings, joint pains, weakness, drowsiness, itching and lethargy. Serotonin is widely distributed in the nervous system of vertebrates and invertebrates and some of its behavioral effects have been preserved along evolution. In vertebrates, which display a wider and much more sophisticated behavioral repertoire, serotonin also modulates sleep, the arousal state , sexual behavior, and others, and deficiencies of the serotonergic system causes disorders such as depression, obsessive-compulsive disorder, phobias, posttraumatic stress disorder, epilepsy, and generalized anxiety disorder. Serotonin in the nervous system acts as a local transmitter at synapses, and as a paracrine or hormonal modulator of circuits upon diffusion, allowing a wide variety of "state-dependent" behavioral responses to different stimuli. Such is the case of aggressive behavior and rhythmic motor patterns , including those responsible for feeding.
  External Links   HMDB ID   HMDB0000259
  VMH ID   SRTN
  KEGG ID   C00780

The epigenetic modification information of this metabolite
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation SLC6A4 EM Info T cells promoter Health [1], [2]

The microbes that produce this metabolite
      Escherichia coli
         Detailed Information MIC Info click to show the detail information of this Microbiota [3], [4]
         Description
Escherichia coli, also known as E. coli, is a gram-negative, facultative anaerobic, rod-shaped, coliform bacteria of the genus Escherichia.
      Bifidobacterium
         Detailed Information MIC Info click to show the detail information of this Microbiota [1], [2]
         Description
Bifidobacteria is a genus of gram-positive, nonmotile, often branched anaerobic bacteria. They are ubiquitous inhabitants of the gastrointestinal tract, vagina and mouth of mammals, including humans.
      Eubacterium hallii
         Detailed Information MIC Info click to show the detail information of this Microbiota [5]
         Description
Anaerobutyricum hallii is an anaerobic bacteria that lives inside the human digestive system.
      Clostridium sporogenes
         Detailed Information MIC Info click to show the detail information of this Microbiota [1], [6]
         Description
Clostridium sporogenes is a species of gram-positive bacteria that belongs to the genus Clostridium.
      Lactobacillus spp.
         Detailed Information MIC Info click to show the detail information of this Microbiota [1], [6]
         Description
Lactobacillus sp. is a bacteria of gram-positive, aerotolerant anaerobics or microaerophilic, rod-shaped, non-spore-forming bacteria.

References
1 Gut Microbiota as Important Mediator Between Diet and DNA Methylation and Histone Modifications in the Host. Nutrients. 2020 Feb 25;12(3):597. doi: 10.3390/nu12030597.
2 Arachidonic and oleic acid exert distinct effects on the DNA methylome. Epigenetics. 2016 May 3;11(5):321-34. doi: 10.1080/15592294.2016.1161873. Epub 2016 Apr 18.
3 S-Adenosylmethionine Treatment of Colorectal Cancer Cell Lines Alters DNA Methylation, DNA Repair and Tumor Progression-Related Gene Expression. Cells. 2020 Aug 9;9(8):1864. doi: 10.3390/cells9081864.
4 Progress in the microbial production of S-adenosyl-L-methionine World J Microbiol Biotechnol. 2016 Sep;32(9):153. doi: 10.1007/s11274-016-2102-8. Epub 2016 Jul 27.
5 Propionate hampers differentiation and modifies histone propionylation and acetylation in skeletal muscle cells. Mech Ageing Dev. 2021 Jun;196:111495. doi: 10.1016/j.mad.2021.111495. Epub 2021 Apr 28.
6 Kynurenine, 3-OH-kynurenine, and anthranilate are nutrient metabolites that alter H3K4 trimethylation and H2AS40 O-GlcNAcylation at hypothalamus-related loci. Sci Rep. 2019 Dec 24;9(1):19768. doi: 10.1038/s41598-019-56341-x.

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