Details of Microbe Species (MIC)

General Information of MIC (ID: MC0944)
  MIC Name
Salmonella
  Lineage Kingdom: Bacteria
Phylum: Proteobacteria
Class: Gammaproteobacteria
Order: Enterobacterales
Family: Enterobacteriaceae
Genus: Salmonella
  Oxygen Sensitivity
Facultative anaerobe
  Microbial Metabolism
Fermentative
  Gram
Negative
  Host Relationship
Pathogen
  Description
Salmonella is a genus of rod-shaped gram-negative bacteria of the family Enterobacteriaceae.
  External Links Taxonomy ID 590
GOLD Database ID Go0546324
GIMICA ID MIC01149

Full List of Metabolite(s) Produced by This MIC
     Molecule Type: Microbial cell components
           Metabolite Name: Lipopolysaccharide Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial cell components
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation DNMT3A EM Info . . . [1], [2]
DNA Methylation DNMT3B EM Info . . . [1], [2]
Histone Acetylation H4 EM Info . IL-6 . [1], [2]
Histone Acetylation Histone EM Info TGF-beta1 cells lysine 9 . [1], [3]
Histone Deacetylation HDAC6 EM Info . . . [1], [2]
Histone Deacetylation HDAC7 EM Info . . . [1], [2]
Histone Phosphorylation Histone EM Info TGF-beta1 cells serine 10 . [4], [3]
miRNA miR-155 EM Info RAW 264.7 cells . . [2]
miRNA miR-146b EM Info RAW 264.7 cells . . [2]
miRNA let-7a EM Info HeLa cells . . [2]
miRNA let-7a EM Info RAW 264.7 cells . . [2]
miRNA let-7c EM Info HeLa cells . . [2]
miRNA let-7c EM Info RAW 264.7 cells . . [2]
miRNA let-7d EM Info HeLa cells . . [2]
miRNA let-7d EM Info RAW 264.7 cells . . [2]
miRNA let-7f EM Info HeLa cells . . [2]
miRNA let-7f EM Info RAW 264.7 cells . . [2]
miRNA let-7i EM Info HeLa cells . . [2]
miRNA let-7i EM Info RAW 264.7 cells . . [2]
miRNA miR-1308 EM Info HeLa cells . . [2]
miRNA miR-146a EM Info RAW 264.7 cells . . [2]
miRNA miR-21 EM Info RAW 264.7 cells . . [2]
miRNA miR-98 EM Info RAW 264.7 cells . . [2]


References
1 Dietary metabolites derived from gut microbiota: critical modulators of epigenetic changes in mammals. Nutr Rev. 2017 May 1;75(5):374-389. doi: 10.1093/nutrit/nux001.
2 Analysis of the host microRNA response to Salmonella uncovers the control of major cytokines by the let-7 family EMBO J. 2011 May 18;30(10):1977-89. doi: 10.1038/emboj.2011.94. Epub 2011 Apr 5.
3 Transforming growth factor-beta 1 inhibits non-pathogenic Gram negative bacteria-induced NF-kappa B recruitment to the interleukin-6 gene promoter in intestinal epithelial cells through modulation of histone acetylation J Biol Chem. 2003 Jun 27;278(26):23851-60. doi: 10.1074/jbc.M300075200. Epub 2003 Apr 2.
4 Total Lipopolysaccharide from the Human Gut Microbiome Silences Toll-Like Receptor Signaling mSystems. 2017 Nov 14;2(6):e00046-17. doi: 10.1128/mSystems.00046-17. eCollection 2017 Nov-Dec.

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