Details of Microbe Species (MIC)

General Information of MIC (ID: MC0856)
  MIC Name
Lactobacillus gasseri
  Lineage Kingdom: Bacteria
Phylum: Firmicutes
Class: Bacilli
Order: Lactobacillales
Family: Lactobacillaceae
Genus: Lactobacillus
  Oxygen Sensitivity
Facultative anaerobe
  Microbial Metabolism
Saccharolytic; Respiratory or Fermentative
  Gram
Positive
  Host Relationship
Probiotic
  Genome Size (bp)
1894360
  No. of Coding Genes
1934
  No. of Non-Coding Genes
52
  No. of Small Non-Coding Genes
52
  No. of Gene Transcripts
1986
  No. of Base Pairs
1912752
  Description
Lactobacillus gasseriis an anaerobic, gram-positive bacteria that falls into the category of lactic acid bacteria.
  External Links Taxonomy ID 1596
GutMDisorder ID gm0399
Genome Assembly ID ASM154652v1
GOLD Database ID Go0505091
GIMICA ID MIC00716

Full List of Metabolite(s) Produced by This MIC
     Molecule Type: Vitamins
           Metabolite Name: Folate (B9) Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [precursors]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
Histone Methylation H3K27 EM Info . Hes1 promoter . [1], [2]
Histone Methylation H3K27 EM Info . Neurog2 promoter . [1], [2]
miRNA miR-10A EM Info . . . [1], [2]
           Metabolite Name: Pyridoxine (B6) Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [precursors]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation Mlh1 EM Info Lymphocytes promoter Colon and rectal cancer [1], [3]
           Metabolite Name: Riboflavin (B2) Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [precursors]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Methylation Zac1 EM Info . . . [4], [2]


References
1 Dietary metabolites derived from gut microbiota: critical modulators of epigenetic changes in mammals. Nutr Rev. 2017 May 1;75(5):374-389. doi: 10.1093/nutrit/nux001.
2 Biosynthesis of Vitamins by Probiotic Bacteria.
3 Metabolic engineering of lactic acid bacteria for the production of industrially important compounds Comput Struct Biotechnol J. 2012 Oct 29;3:e201210003. doi: 10.5936/csbj.201210003. eCollection 2012.
4 Associations of dietary methyl donor intake with MLH1 promoter hypermethylation and related molecular phenotypes in sporadic colorectal cancer. Carcinogenesis. 2008 Sep;29(9):1765-73. doi: 10.1093/carcin/bgn074. Epub 2008 Mar 13.

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