General Information of Metabolite (ID: MT038)
  Meta Name
Methionine
  Unify Name
L-Methionine
  Synonym    Click to Show/Hide the Detailed Synonyms of This Metabolite
(2S)-2-amino-4-(Methylsulfanyl)butanoic acid;(S)-2-amino-4-(methylthio)Butanoic acid;(S)-2-amino-4-(methylthio)Butyric acid;(S)-Methionine;L-(-)-Methionine;L-alpha-amino-gamma-Methylmercaptobutyric acid;L-Methionin;M;Met;METHIONINE;(2S)-2-amino-4-(Methylsulfanyl)butanoate;(2S)-2-amino-4-(Methylsulphanyl)butanoate;(2S)-2-amino-4-(Methylsulphanyl)butanoic acid;(S)-2-amino-4-(methylthio)Butanoate;(S)-2-amino-4-(methylthio)Butyrate;L-a-amino-g-Methylmercaptobutyrate;L-a-amino-g-Methylmercaptobutyric acid;L-alpha-amino-gamma-Methylmercaptobutyrate;L-Alpha-amino-gama-methylmercaptobutyrate;L-Alpha-amino-gama-methylmercaptobutyric acid;(L)-Methionine;(S)-(+)-Methionine;(S)-2-amino-4-(methylthio)-Butanoate;(S)-2-amino-4-(methylthio)-Butanoic acid;2-amino-4-(methylthio)Butyrate;2-amino-4-(methylthio)Butyric acid;2-amino-4-Methylthiobutanoate;2-amino-4-Methylthiobutanoic acid;a-amino-g-Methylmercaptobutyrate;a-amino-g-Methylmercaptobutyric acid;Acimethin;alpha-amino-alpha-Aminobutyric acid;alpha-amino-gamma-Methylmercaptobutyrate;alpha-amino-gamma-Methylmercaptobutyric acid;Cymethion;g-methylthio-a-Aminobutyrate;g-methylthio-a-Aminobutyric acid;gamma-methylthio-alpha-Aminobutyrate;gamma-methylthio-alpha-Aminobutyric acid;H-Met-H;H-Met-OH;L(-)-amino-alpha-amino-alpha-Aminobutyric acid;L(-)-amino-gamma-Methylthiobutyric acid;L-2-amino-4-(methylthio)Butyric acid;L-2-amino-4-Methylthiobutyric acid;L-a-amino-g-Methylthiobutyrate;L-a-amino-g-Methylthiobutyric acid;L-alpha-amino-gamma-Methylthiobutyrate;L-alpha-amino-gamma-Methylthiobutyric acid;L-gamma-methylthio-alpha-Aminobutyric acid;L-Methioninum;Liquimeth;Mepron;Methilanin;Methioninum;Metionina;neo-Methidin;Poly-L-methionine;Polymethionine;S-Methionine;S-Methyl-L-homocysteine;Toxin war;L-Isomer methionine;Methionine, L-isomer;Pedameth;Methionine, L isomer;
  Molecule Type
Amino acid (AAs)
  Formula
C5H11NO2S
  Inchi Key
FFEARJCKVFRZRR-BYPYZUCNSA-N
  Description    Click to Show/Hide the Detailed Description of This Metabolite
Human Metabolome Database (HMDB): Methionine is an essential amino acid (there are 9 essential amino acids) required for normal growth and development of humans, other mammals, and avian species. In addition to being a substrate for protein synthesis, it is an intermediate in transmethylation reactions, serving as the major methyl group donor in vivo, including the methyl groups for DNA and RNA intermediates. Methionine is a methyl acceptor for 5-methyltetrahydrofolate-homocysteine methyltransferase (methionine synthase), the only reaction that allows for the recycling of this form of folate, and is also a methyl acceptor for the catabolism of betaine. Methionine is the metabolic precursor for cysteine. Only the sulfur atom from methionine is transferred to cysteine; the carbon skeleton of cysteine is donated by serine (PMID: 16702340). There is a general consensus concerning normal sulfur amino acid (SAA) requirements. WHO recommendations amount to 13 mg/kg per 24 h in healthy adults. This amount is roughly doubled in artificial nutrition regimens. In disease or after trauma, requirements may be altered for methionine, cysteine, and taurine. Although in specific cases of congenital enzyme deficiency, prematurity, or diminished liver function, hypermethioninemia or hyperhomocysteinemia may occur, SAA supplementation can be considered safe in amounts exceeding 2-3 times the minimum recommended daily intake. Apart from some very specific indications (e.g. acetaminophen poisoning) the usefulness of SAA supplementation is not yet established (PMID: 16702341). Methionine is known to exacerbate psychopathological symptoms in schizophrenic patients, but there is no evidence of similar effects in healthy subjects. The role of methionine as a precursor of homocysteine is the most notable cause for concern. Acute doses of methionine can lead to acute increases in plasma homocysteine, which can be used as an index of the susceptibility to cardiovascular disease. Sufficiently high doses of methionine can actually result in death. Longer-term studies in adults have indicated no adverse consequences of moderate fluctuations in dietary methionine intake, but intakes higher than 5 times the normal amount resulted in elevated homocysteine levels. These effects of methionine on homocysteine and vascular function are moderated by supplements of vitamins B-6, B-12, C, and folic acid (PMID: 16702346). When present in sufficiently high levels, methionine can act as an atherogen and a metabotoxin. An atherogen is a compound that when present at chronically high levels causes atherosclerosis and cardiovascular disease. A metabotoxin is an endogenously produced metabolite that causes adverse health effects at chronically high levels. Chronically high levels of methionine are associated with at least ten inborn errors of metabolism, including cystathionine beta-synthase deficiency, glycine N-methyltransferase deficiency, homocystinuria, tyrosinemia, galactosemia, homocystinuria-megaloblastic anemia due to defects in cobalamin metabolism, methionine adenosyltransferase deficiency, methylenetetrahydrofolate reductase deficiency, and S-adenosylhomocysteine (SAH) hydrolase deficiency. Chronically elevated levels of methionine in infants can lead to intellectual disability and other neurological problems, delays in motor skills, sluggishness, muscle weakness, and liver problems. Many individuals with these metabolic disorders tend to develop cardiovascular disease later in life. Studies on feeding rodents high levels of methionine have shown that methionine promotes atherosclerotic plaques independently of homocysteine levels (PMID: 26647293). A similar study in Finnish men showed the same effect (PMID: 16487911).
  External Links   HMDB ID   HMDB0000696
  VMH ID   met_L
  KEGG ID   C00073
  Metlin ID   5664

The epigenetic modification information of this metabolite
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
DNA Hypermethylation DNMT3A EM Info Blood cells . . [1], [2]
Histone Trimethylation H3 EM Info Blood cells lysine 4 . [1], [2]
miRNA miR-328-3p EM Info . . . [1], [2]

The microbes that produce this metabolite
      Clostridium bartlettii DSM 16795
         Detailed Information MIC Info click to show the detail information of this Microbiota [3], [2]
         Description
Clostridium bartlettii DSM 16795 is a strain of obligate anaerobic, gram-positive bacteria.
      Clostridium difficile CD196
         Detailed Information MIC Info click to show the detail information of this Microbiota [4], [2]
         Description
Clostridium difficile CD196 is a strain of obligate anaerobic, gram-positive, proteolytic bacteria.
      Clostridium difficile NAP07
         Detailed Information MIC Info click to show the detail information of this Microbiota [4], [2]
         Description
Clostridium difficile NAP07 is a strain of obligate anaerobic, gram-positive, proteolytic bacteria.
      Clostridium difficile NAP08
         Detailed Information MIC Info click to show the detail information of this Microbiota [4], [2]
         Description
Clostridium difficile NAP08 is a strain of obligate anaerobic, gram-positive, proteolytic bacteria.
      Clostridium difficile R20291
         Detailed Information MIC Info click to show the detail information of this Microbiota [4], [2]
         Description
Clostridium difficile R20291 is a strain of obligate anaerobic, gram-positive, proteolytic bacteria.
      Clostridium sordellii ATCC 9714
         Detailed Information MIC Info click to show the detail information of this Microbiota [1], [2]
         Description
Clostridium sordellii ATCC 9714 is a strain of obligate anaerobic, gram-positive, saccharolytic bacteria.
      Clostridium sticklandii DSM 519
         Detailed Information MIC Info click to show the detail information of this Microbiota [5], [2]
         Description
Clostridium sticklandii DSM 519 is a strain of obligate anaerobic, gram-positive, proteolytic bacteria.
      Fusobacterium russii ATCC 25533
         Detailed Information MIC Info click to show the detail information of this Microbiota [4], [2]
         Description
Fusobacteria russii ATCC 25533 is a strain of microaerophile, gram-negative bacteria.
      Porphyromonas gingivalis W83
         Detailed Information MIC Info click to show the detail information of this Microbiota [5], [2]
         Description
Porphyromonas gingivalis W83 is a strain of obligate anaerobic, gram-negative, asaccharolytic, proteolytic bacteria.
      Dyadobacter fermentans DSM 18053
         Detailed Information MIC Info click to show the detail information of this Microbiota [2], [6]
         Description
Dyadobacter fermentans DSM 18053 is a gram-negative and aerobic strain from the genus of Dyadobacter.
      Gordonibacter pamelaeae 7-10-1-bT, DSM 19378
         Detailed Information MIC Info click to show the detail information of this Microbiota [2], [6]
         Description
Gordonibacter pamelaeae 7-10-1-bT, DSM 19378 is a gram-positive and anaerobic strain from the genus of Gordonibacter.

References
1 Butyrate greatly enhances derivation of human induced pluripotent stem cells by promoting epigenetic remodeling and the expression of pluripotency-associated genes. Stem Cells. 2010 Apr;28(4):713-20. doi: 10.1002/stem.402.
2 The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease. Nucleic Acids Res. 2019 Jan 8;47(D1):D614-D624. doi: 10.1093/nar/gky992.
3 Acetate functions as an epigenetic metabolite to promote lipid synthesis under hypoxia. Nat Commun. 2016 Jun 30;7:11960. doi: 10.1038/ncomms11960.
4 Butyrate drives the acetylation of histone H3K9 to activate steroidogenesis through PPAR-gamma and PGC1-alpha pathways in ovarian granulosa cells. FASEB J. 2021 Feb;35(2):e21316. doi: 10.1096/fj.202000444R.
5 Serum aromatic and branched-chain amino acids associated with NASH demonstrate divergent associations with serum lipids. Liver Int. 2021 Apr;41(4):754-763. doi: 10.1111/liv.14743. Epub 2020 Dec 5.
6 Dysregulation of methionine metabolism in multiple sclerosis. Neurochem Int. 2018 Jan;112:1-4. doi: 10.1016/j.neuint.2017.10.011. Epub 2017 Oct 26.

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