Details of Microbe Species (MIC)

General Information of MIC (ID: MC1274)
  MIC Name
Bifidobacteria
  Synonym
Bifidibacterium, Tissieria
  Lineage Kingdom: Bacteria
Phylum: Actinobacteria
Class: Actinomycetia
Order: Bifidobacteriales
Family: Bifidobacteriaceae
Genus: Bifidobacterium
  Oxygen Sensitivity
Anaerobe
  Microbial Metabolism
Fermentative
  Gram
Positive
  Host Relationship
Probiotic
  No. of Coding Genes
1846
  No. of Non-Coding Genes
57
  No. of Small Non-Coding Genes
57
  No. of Gene Transcripts
1959
  No. of Pseudogenes 56
  Description
Bifidobacteria are considered to be probiotic microorganisms, which, in general, are helpful in maintaining appropriate balances between the various floras in different sections of the human intestine.
  External Links Taxonomy ID 1678
GutMDisorder ID gm0105
Genome Assembly ID ASM353435v1

Full List of Metabolite(s) Produced by This MIC
     Molecule Type: Fatty acids
           Metabolite Name: Butyrate Click to Show/Hide
              Detailed Infomation Meta Info click to show the detail information of this Metabolite
              Metabolic Classification Microbial producted compound [end-products]
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
Histone Acetylation H3K9 EM Info KGN cells GPR43 . [1], [2]
miRNA miR-92a EM Info Colon cancer cells . Colon cancer [3], [1]


References
1 The microbiota-gut-brain axis: An emerging role for the epigenome. Exp Biol Med (Maywood). 2020 Jan;245(2):138-145. doi: 10.1177/1535370219891690. Epub 2019 Dec 5.
2 Butyrate drives the acetylation of histone H3K9 to activate steroidogenesis through PPAR-gamma and PGC1-alpha pathways in ovarian granulosa cells. FASEB J. 2021 Feb;35(2):e21316. doi: 10.1096/fj.202000444R.
3 Crosstalk between the microbiome and epigenome: messages from bugs. J Biochem. 2018 Feb 1;163(2):105-112. doi: 10.1093/jb/mvx080.

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