General Information of Metabolite (ID: MT105)
  Meta Name
urolithin A
  Unify Name
Urolithin A
  Synonym    Click to Show/Hide the Detailed Synonyms of This Metabolite
3,8-Dihydroxy-6H-dibenzo(b,D)pyran-6-one;Urolithin a
  Molecule Type
Coumarins and derivatives
  Formula
C13H8O4
  Inchi Key
RIUPLDUFZCXCHM-UHFFFAOYSA-N
  Description    Click to Show/Hide the Detailed Description of This Metabolite
Human Metabolome Database (HMDB): Urolithin A belongs to the class of organic compounds known as coumarins and derivatives. These are polycyclic aromatic compounds containing a 1-benzopyran moiety with a ketone group at the C2 carbon atom (1-benzopyran-2-one). Ellagitannins are hydrolyzed in the gut to release ellagic acid, which is further processed by the gut microflora into urolithins through the loss of one of its two lactones and by successive removal of hydroxyl groups. Urolithin A is not known to be found in any food source. Urolithin A is an extremely weak basic (essentially neutral) compound (based on its pKa). The conversion of the ellagic acids into urolithin A depends on individual microflora composition and can vary significantly. Ellagic acid itself results from the hydrolysis of ellagitannins in the gut in the presence of water. Since the 2000s, urolithin A has been subject of preliminary studies regarding its possible biological effects. This effect has been observed in different animal species (mammalian cells, rodents and C. elegans).
  External Links   HMDB ID   HMDB0013695

The epigenetic modification information of this metabolite
Modification Type Molecule EM Info Cell/Tissue Type Modified sites Condition REF
Histone Acetylation H3K9 EM Info U937 cells gp91-phox promoter . [1], [2]
Histone Acetylation HAT EM Info THP-1 cells . . [1], [2]

The microbes that produce this metabolite
      Gordonibacter urolithinfaciens
         Detailed Information MIC Info click to show the detail information of this Microbiota [1], [2]
         Description
Gordonibacter urolithinfaciens was isolated from human feces and is able to metabolize ellagic acid (a dietary phenolic compound present in various fruits) to urolithins.

References
1 Impact of dietary gut microbial metabolites on the epigenome. Philos Trans R Soc Lond B Biol Sci. 2018 Jun 5;373(1748):20170359. doi: 10.1098/rstb.2017.0359.
2 Urolithins, the rescue of "old" metabolites to understand a "new" concept: Metabotypes as a nexus among phenolic metabolism, microbiota dysbiosis, and host health status. Mol Nutr Food Res. 2017 Jan;61(1). doi: 10.1002/mnfr.201500901. Epub 2016 Jun 20.

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